Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AC148477.4-201ENST00000613430 1793 ntBASIC17.23■□□□□ 0.35
ARID3AQ99856 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 MIR193BHG-211ENST00000641433 5365 ntBASIC17.23■□□□□ 0.35
ARID3AQ99856 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ARID3AQ99856 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 AC069262.1-201ENST00000539058 672 ntBASIC17.23■□□□□ 0.35
ARID3AQ99856 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 AL133215.2-201ENST00000609242 977 ntBASIC17.23■□□□□ 0.35
ARID3AQ99856 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.23■□□□□ 0.35
ARID3AQ99856 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
ARID3AQ99856 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ARID3AQ99856 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ARID3AQ99856 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC17.22■□□□□ 0.35
ARID3AQ99856 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.22■□□□□ 0.35
ARID3AQ99856 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC17.22■□□□□ 0.35
ARID3AQ99856 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.22■□□□□ 0.35
ARID3AQ99856 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.22■□□□□ 0.35
ARID3AQ99856 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.22■□□□□ 0.35
ARID3AQ99856 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.22■□□□□ 0.35
ARID3AQ99856 AL139010.1-201ENST00000454878 894 ntBASIC17.22■□□□□ 0.35
ARID3AQ99856 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC17.22■□□□□ 0.35
ARID3AQ99856 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.22■□□□□ 0.35
ARID3AQ99856 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.22■□□□□ 0.35
ARID3AQ99856 AC243562.2-201ENST00000561247 970 ntBASIC17.22■□□□□ 0.35
ARID3AQ99856 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.22■□□□□ 0.35
ARID3AQ99856 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.22■□□□□ 0.35
ARID3AQ99856 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.22■□□□□ 0.35
ARID3AQ99856 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.22■□□□□ 0.35
ARID3AQ99856 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 C2-206ENST00000442278 2434 ntTSL 2 BASIC17.22■□□□□ 0.35
ARID3AQ99856 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ARID3AQ99856 AC083964.2-201ENST00000623988 2396 ntBASIC17.22■□□□□ 0.35
ARID3AQ99856 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.22■□□□□ 0.35
ARID3AQ99856 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ARID3AQ99856 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 TSN-212ENST00000536142 3328 ntTSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ARID3AQ99856 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 NUTM2HP-201ENST00000442076 2498 ntBASIC17.21■□□□□ 0.35
ARID3AQ99856 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
ARID3AQ99856 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.21■□□□□ 0.35
ARID3AQ99856 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.21■□□□□ 0.35
ARID3AQ99856 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.21■□□□□ 0.35
ARID3AQ99856 AC004449.1-201ENST00000564240 433 ntBASIC17.21■□□□□ 0.35
ARID3AQ99856 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ARID3AQ99856 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ARID3AQ99856 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms