Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.61■□□□□ 0.09
SMOQ99835 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 AC068587.6-202ENST00000641839 5619 ntBASIC15.61■□□□□ 0.09
SMOQ99835 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 AC006033.1-201ENST00000440505 426 ntBASIC15.61■□□□□ 0.09
SMOQ99835 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.61■□□□□ 0.09
SMOQ99835 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
SMOQ99835 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.61■□□□□ 0.09
SMOQ99835 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.61■□□□□ 0.09
SMOQ99835 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 AC132192.2-201ENST00000596206 1147 ntBASIC15.61■□□□□ 0.09
SMOQ99835 GPR182-203ENST00000622922 591 ntBASIC15.61■□□□□ 0.09
SMOQ99835 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SMOQ99835 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SMOQ99835 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SMOQ99835 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SMOQ99835 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.6■□□□□ 0.09
SMOQ99835 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC15.6■□□□□ 0.09
SMOQ99835 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.6■□□□□ 0.09
SMOQ99835 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.6■□□□□ 0.09
SMOQ99835 KLF2P1-201ENST00000447438 1042 ntBASIC15.6■□□□□ 0.09
SMOQ99835 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.6■□□□□ 0.09
SMOQ99835 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SMOQ99835 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
SMOQ99835 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SMOQ99835 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.6■□□□□ 0.09
SMOQ99835 AC007663.3-201ENST00000609632 465 ntBASIC15.6■□□□□ 0.09
SMOQ99835 AC027601.3-201ENST00000622907 509 ntBASIC15.6■□□□□ 0.09
SMOQ99835 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
SMOQ99835 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.6■□□□□ 0.09
SMOQ99835 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.6■□□□□ 0.09
SMOQ99835 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SMOQ99835 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.6■□□□□ 0.09
SMOQ99835 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
SMOQ99835 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.59■□□□□ 0.09
SMOQ99835 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SMOQ99835 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
SMOQ99835 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.59■□□□□ 0.09
SMOQ99835 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMOQ99835 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms