Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 AC152010.1-201ENST00000415779 2006 ntBASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
ATPAF1Q5TC12 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SPTLC1P1-201ENST00000447199 261 ntBASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 DOC2GP-202ENST00000514950 1163 ntBASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AC015910.1-201ENST00000579400 975 ntBASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AL359881.3-201ENST00000602640 1721 ntBASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
ATPAF1Q5TC12 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.08□□□□□ -0.31
ATPAF1Q5TC12 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.08□□□□□ -0.31
ATPAF1Q5TC12 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.08□□□□□ -0.31
ATPAF1Q5TC12 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
ATPAF1Q5TC12 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ATPAF1Q5TC12 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms