Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
IRX4P78413 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.71■□□□□ 0.1
IRX4P78413 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
IRX4P78413 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
IRX4P78413 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
IRX4P78413 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.7■□□□□ 0.1
IRX4P78413 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 RPL13P2-201ENST00000440687 659 ntBASIC15.7■□□□□ 0.1
IRX4P78413 AL355864.2-201ENST00000447420 863 ntBASIC15.7■□□□□ 0.1
IRX4P78413 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
IRX4P78413 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.7■□□□□ 0.1
IRX4P78413 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.7■□□□□ 0.1
IRX4P78413 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
IRX4P78413 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
IRX4P78413 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
IRX4P78413 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 AC126365.1-201ENST00000578585 1514 ntBASIC15.69■□□□□ 0.1
IRX4P78413 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.69■□□□□ 0.1
IRX4P78413 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
IRX4P78413 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
IRX4P78413 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
IRX4P78413 YBX1P6-201ENST00000442962 1002 ntBASIC15.69■□□□□ 0.1
IRX4P78413 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
IRX4P78413 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.69■□□□□ 0.1
IRX4P78413 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 ZNF767P-206ENST00000513792 565 ntBASIC15.69■□□□□ 0.1
IRX4P78413 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.69■□□□□ 0.1
IRX4P78413 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.69■□□□□ 0.1
IRX4P78413 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.69■□□□□ 0.1
IRX4P78413 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.69■□□□□ 0.1
IRX4P78413 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
IRX4P78413 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
IRX4P78413 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.68■□□□□ 0.1
IRX4P78413 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
IRX4P78413 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms