Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC9.6□□□□□ -0.87
UBE2AP49459 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC9.6□□□□□ -0.87
UBE2AP49459 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 RERG-209ENST00000546331 1383 ntTSL 2 BASIC9.6□□□□□ -0.87
UBE2AP49459 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.6□□□□□ -0.87
UBE2AP49459 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC9.6□□□□□ -0.87
UBE2AP49459 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
UBE2AP49459 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 MARS-233ENST00000628866 2583 ntTSL 5 BASIC9.6□□□□□ -0.87
UBE2AP49459 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE2AP49459 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE2AP49459 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 GSN-215ENST00000545652 2428 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UBE2AP49459 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 WRB-204ENST00000398753 699 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE2AP49459 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC9.59□□□□□ -0.87
UBE2AP49459 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE2AP49459 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 AL512361.1-201ENST00000554200 418 ntBASIC9.59□□□□□ -0.87
UBE2AP49459 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE2AP49459 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC9.59□□□□□ -0.87
UBE2AP49459 AL158211.3-201ENST00000607385 239 ntBASIC9.59□□□□□ -0.87
UBE2AP49459 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 GSN-203ENST00000373808 2664 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 LARP1-201ENST00000336314 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
UBE2AP49459 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
UBE2AP49459 CICP24-201ENST00000605464 2705 ntBASIC9.59□□□□□ -0.87
UBE2AP49459 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC9.59□□□□□ -0.87
UBE2AP49459 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
UBE2AP49459 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.59□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms