Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
SNCAP37840 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.42□□□□□ -0.42
SNCAP37840 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
SNCAP37840 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.42□□□□□ -0.42
SNCAP37840 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.42□□□□□ -0.42
SNCAP37840 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.42□□□□□ -0.42
SNCAP37840 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SNCAP37840 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC12.42□□□□□ -0.42
SNCAP37840 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SNCAP37840 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SNCAP37840 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
SNCAP37840 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.42□□□□□ -0.42
SNCAP37840 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 ELL2P1-201ENST00000413990 1906 ntBASIC12.41□□□□□ -0.42
SNCAP37840 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SNCAP37840 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.41□□□□□ -0.42
SNCAP37840 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.41□□□□□ -0.42
SNCAP37840 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.41□□□□□ -0.42
SNCAP37840 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 AC005829.1-201ENST00000570002 483 ntBASIC12.41□□□□□ -0.42
SNCAP37840 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.41□□□□□ -0.42
SNCAP37840 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 AC023090.2-201ENST00000625182 2110 ntBASIC12.41□□□□□ -0.42
SNCAP37840 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SNCAP37840 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SNCAP37840 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.41□□□□□ -0.42
SNCAP37840 CICP11-201ENST00000434745 2827 ntBASIC12.41□□□□□ -0.42
SNCAP37840 AL035456.1-201ENST00000456064 1369 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms