Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.1■□□□□ 0.01
KRT4P19013 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 AL512361.1-201ENST00000554200 418 ntBASIC15.1■□□□□ 0.01
KRT4P19013 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.1■□□□□ 0.01
KRT4P19013 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
KRT4P19013 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.1■□□□□ 0.01
KRT4P19013 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
KRT4P19013 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
KRT4P19013 INE2-201ENST00000630399 1874 ntBASIC15.1■□□□□ 0.01
KRT4P19013 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.09■□□□□ 0.01
KRT4P19013 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 POLD2P1-201ENST00000511220 997 ntBASIC15.09■□□□□ 0.01
KRT4P19013 KRT18P58-201ENST00000527480 1120 ntBASIC15.09■□□□□ 0.01
KRT4P19013 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
KRT4P19013 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.09■□□□□ 0.01
KRT4P19013 AL109936.8-201ENST00000641772 604 ntBASIC15.09■□□□□ 0.01
KRT4P19013 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
KRT4P19013 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
KRT4P19013 AC105206.1-202ENST00000314927 2368 ntBASIC15.09■□□□□ 0.01
KRT4P19013 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
KRT4P19013 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT4P19013 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
KRT4P19013 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
KRT4P19013 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
KRT4P19013 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
KRT4P19013 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT4P19013 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT4P19013 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
KRT4P19013 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
KRT4P19013 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
KRT4P19013 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.08■□□□□ 0
KRT4P19013 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT4P19013 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.08■□□□□ 0
KRT4P19013 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
KRT4P19013 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
KRT4P19013 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT4P19013 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT4P19013 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT4P19013 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.08■□□□□ 0
KRT4P19013 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
KRT4P19013 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.08■□□□□ 0
KRT4P19013 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.08■□□□□ 0
KRT4P19013 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0
KRT4P19013 AP000344.2-201ENST00000512987 629 ntBASIC15.08■□□□□ 0
KRT4P19013 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.08■□□□□ 0
KRT4P19013 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.08■□□□□ 0
KRT4P19013 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.08■□□□□ 0
KRT4P19013 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.08■□□□□ 0
KRT4P19013 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms