Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 AC126335.2-201ENST00000623362 4637 ntBASIC13.21□□□□□ -0.29
ATF1P18846 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.21□□□□□ -0.29
ATF1P18846 AC027612.1-201ENST00000445234 2395 ntBASIC13.21□□□□□ -0.29
ATF1P18846 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 AL139400.1-201ENST00000366220 510 ntBASIC13.21□□□□□ -0.29
ATF1P18846 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.21□□□□□ -0.29
ATF1P18846 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.21□□□□□ -0.29
ATF1P18846 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.21□□□□□ -0.29
ATF1P18846 AC027369.6-201ENST00000525520 931 ntBASIC13.21□□□□□ -0.29
ATF1P18846 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.21□□□□□ -0.29
ATF1P18846 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 AC004449.1-201ENST00000564240 433 ntBASIC13.21□□□□□ -0.29
ATF1P18846 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
ATF1P18846 SAMD11P1-201ENST00000571429 661 ntBASIC13.21□□□□□ -0.29
ATF1P18846 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 AC000095.1-201ENST00000603208 874 ntBASIC13.21□□□□□ -0.29
ATF1P18846 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
ATF1P18846 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
ATF1P18846 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.21□□□□□ -0.29
ATF1P18846 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.21□□□□□ -0.29
ATF1P18846 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.21□□□□□ -0.29
ATF1P18846 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
ATF1P18846 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATF1P18846 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATF1P18846 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATF1P18846 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.21□□□□□ -0.3
ATF1P18846 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
ATF1P18846 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
ATF1P18846 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATF1P18846 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
ATF1P18846 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ATF1P18846 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 AC087499.5-201ENST00000452760 1342 ntBASIC13.2□□□□□ -0.3
ATF1P18846 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
ATF1P18846 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 DNAJB3-202ENST00000449667 1266 ntBASIC13.2□□□□□ -0.3
ATF1P18846 KLF2P3-201ENST00000451977 1087 ntBASIC13.2□□□□□ -0.3
ATF1P18846 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATF1P18846 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.2□□□□□ -0.3
ATF1P18846 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 TIMM17BP1-201ENST00000545713 516 ntBASIC13.2□□□□□ -0.3
ATF1P18846 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.2□□□□□ -0.3
ATF1P18846 AC044860.1-202ENST00000559481 777 ntBASIC13.2□□□□□ -0.3
ATF1P18846 AC025678.2-201ENST00000562061 970 ntBASIC13.2□□□□□ -0.3
ATF1P18846 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.2□□□□□ -0.3
ATF1P18846 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ATF1P18846 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms