Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.13■□□□□ 0.01
THRAP10827 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
THRAP10827 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THRAP10827 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 CROCCP4-201ENST00000457096 498 ntBASIC15.12■□□□□ 0.01
THRAP10827 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 SNX29P1-201ENST00000548357 1007 ntBASIC15.12■□□□□ 0.01
THRAP10827 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.12■□□□□ 0.01
THRAP10827 AC124283.3-201ENST00000570869 594 ntBASIC15.12■□□□□ 0.01
THRAP10827 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.12■□□□□ 0.01
THRAP10827 COX11-210ENST00000639671 696 ntBASIC15.12■□□□□ 0.01
THRAP10827 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.12■□□□□ 0.01
THRAP10827 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
THRAP10827 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.12■□□□□ 0.01
THRAP10827 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.12■□□□□ 0.01
THRAP10827 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THRAP10827 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 AC018665.1-201ENST00000622927 1362 ntBASIC15.11■□□□□ 0.01
THRAP10827 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
THRAP10827 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.11■□□□□ 0.01
THRAP10827 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 AC134915.1-201ENST00000426461 574 ntBASIC15.11■□□□□ 0.01
THRAP10827 ACTG1P3-201ENST00000431775 1114 ntBASIC15.11■□□□□ 0.01
THRAP10827 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 KRT223P-202ENST00000449164 1292 ntBASIC15.11■□□□□ 0.01
THRAP10827 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
THRAP10827 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.11■□□□□ 0.01
THRAP10827 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
THRAP10827 MIR4259-201ENST00000584466 101 ntBASIC15.11■□□□□ 0.01
THRAP10827 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.11■□□□□ 0.01
THRAP10827 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.11■□□□□ 0.01
THRAP10827 AL049840.4-201ENST00000602422 811 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms