Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 INE2-201ENST00000630399 1874 ntBASIC13.44□□□□□ -0.26
CDRT1O95170 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.44□□□□□ -0.26
CDRT1O95170 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.44□□□□□ -0.26
CDRT1O95170 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.44□□□□□ -0.26
CDRT1O95170 RARRES2P9-201ENST00000565168 469 ntBASIC13.44□□□□□ -0.26
CDRT1O95170 AC040169.1-201ENST00000565382 521 ntBASIC13.44□□□□□ -0.26
CDRT1O95170 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.44□□□□□ -0.26
CDRT1O95170 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CDRT1O95170 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.44□□□□□ -0.26
CDRT1O95170 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.44□□□□□ -0.26
CDRT1O95170 AC004899.2-201ENST00000622993 3860 ntBASIC13.44□□□□□ -0.26
CDRT1O95170 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 LILRP1-201ENST00000444199 1370 ntBASIC13.44□□□□□ -0.26
CDRT1O95170 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.44□□□□□ -0.26
CDRT1O95170 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CDRT1O95170 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 AC019294.4-201ENST00000561777 2905 ntBASIC13.43□□□□□ -0.26
CDRT1O95170 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
CDRT1O95170 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CDRT1O95170 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 MCCD1P2-201ENST00000423228 335 ntBASIC13.43□□□□□ -0.26
CDRT1O95170 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.43□□□□□ -0.26
CDRT1O95170 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.43□□□□□ -0.26
CDRT1O95170 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.43□□□□□ -0.26
CDRT1O95170 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.43□□□□□ -0.26
CDRT1O95170 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.43□□□□□ -0.26
CDRT1O95170 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CDRT1O95170 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.43□□□□□ -0.26
CDRT1O95170 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CDRT1O95170 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CDRT1O95170 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms