Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ACTN4O43707 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 ACKR1-201ENST00000368121 1240 ntBASIC16.81■□□□□ 0.28
ACTN4O43707 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.81■□□□□ 0.28
ACTN4O43707 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.81■□□□□ 0.28
ACTN4O43707 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 ENPP7P5-201ENST00000541031 1031 ntBASIC16.81■□□□□ 0.28
ACTN4O43707 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.81■□□□□ 0.28
ACTN4O43707 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.81■□□□□ 0.28
ACTN4O43707 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.81■□□□□ 0.28
ACTN4O43707 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.81■□□□□ 0.28
ACTN4O43707 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.81■□□□□ 0.28
ACTN4O43707 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 MYO15B-237ENST00000642007 4893 ntBASIC16.81■□□□□ 0.28
ACTN4O43707 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 SALL4P5-201ENST00000419001 1760 ntBASIC16.81■□□□□ 0.28
ACTN4O43707 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ACTN4O43707 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTN4O43707 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ACTN4O43707 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ACTN4O43707 LRRC59-203ENST00000576448 1531 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.8■□□□□ 0.28
ACTN4O43707 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 AL365209.1-201ENST00000624418 6473 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.8■□□□□ 0.28
ACTN4O43707 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 TLE1P1-201ENST00000422965 589 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.8■□□□□ 0.28
ACTN4O43707 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 AC022137.2-201ENST00000503482 481 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 AP001063.1-201ENST00000568332 529 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.8■□□□□ 0.28
ACTN4O43707 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 AC092364.2-202ENST00000597012 1073 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 OR2I1P-210ENST00000642037 4691 ntBASIC16.8■□□□□ 0.28
ACTN4O43707 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ACTN4O43707 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTN4O43707 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC16.8■□□□□ 0.28
ACTN4O43707 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.79■□□□□ 0.28
ACTN4O43707 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ACTN4O43707 MSTO2P-201ENST00000314835 1709 ntBASIC16.79■□□□□ 0.28
ACTN4O43707 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ACTN4O43707 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms