Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 FO393414.2-201ENST00000405153 598 ntBASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 RPL13AP23-201ENST00000480739 586 ntBASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 SLC25A6P4-201ENST00000586535 553 ntBASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 AC027612.1-201ENST00000445234 2395 ntBASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MEIS3P1A6NDR6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC016397.2-201ENST00000624848 1985 ntBASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 TCAF1P1-201ENST00000414990 2232 ntBASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 FAAHP1-202ENST00000446499 1238 ntBASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC069335.1-201ENST00000489972 472 ntBASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 RNA5SP416-201ENST00000516838 111 ntBASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 KRT8P23-201ENST00000560090 1207 ntBASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 CICP16-201ENST00000502609 2813 ntBASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.92□□□□□ -0.34
MEIS3P1A6NDR6 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 HLA-A-201ENST00000376802 1334 ntBASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MEIS3P1A6NDR6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms