Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 MIR6074-201ENST00000612054 107 ntBASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRDV1A0A1B0GX56 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AL035456.1-201ENST00000456064 1369 ntBASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AC004241.5-201ENST00000623870 2448 ntBASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ALG1L8P-201ENST00000533887 760 ntBASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AC026150.2-201ENST00000564693 1156 ntBASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 LINC00628-201ENST00000628516 1289 ntBASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 KRT8P14-201ENST00000414254 1442 ntBASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRDV1A0A1B0GX56 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.19□□□□□ -0.3
TRDV1A0A1B0GX56 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms