Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SPDYE10P-202ENST00000612005 668 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 SPDYE8P-202ENST00000612377 668 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 LILRP1-201ENST00000444199 1370 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 OR2I1P-208ENST00000641137 4948 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CICP17-201ENST00000418553 2377 ntBASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 TARDBPP1-201ENST00000442013 1203 ntBASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.63□□□□□ -0.39
KCNIP3Q9Y2W7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 KRT8P22-201ENST00000562317 1415 ntBASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 AC023090.2-201ENST00000625182 2110 ntBASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 DGCR9-201ENST00000609630 2415 ntBASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 RARRES2P9-201ENST00000565168 469 ntBASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.62□□□□□ -0.39
KCNIP3Q9Y2W7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms