Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TMEM261P1-201ENST00000604899 340 ntBASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 AC025181.2-201ENST00000606994 802 ntBASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 AC005562.1-201ENST00000583030 3219 ntBASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
LINC00474Q9P2X8 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LINC00474Q9P2X8 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC098614.1-201ENST00000368528 745 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 GHSR-202ENST00000427970 912 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC123567.1-201ENST00000548294 1261 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC190387.1-201ENST00000551683 408 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC023310.3-201ENST00000557027 670 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC100756.1-201ENST00000562736 682 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC138749.3-201ENST00000567691 622 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AL049840.4-201ENST00000602422 811 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC116165.1-201ENST00000611806 668 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 AC012508.2-201ENST00000567613 1472 ntBASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
LINC00474Q9P2X8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms