Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TUBB1P2-201ENST00000422712 1306 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 TUBB1P1-201ENST00000503144 1300 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AL138709.1-201ENST00000614840 1693 ntBASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CUEDC1Q9NWM3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 SBF1P1-201ENST00000444527 5631 ntBASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 SNX29P1-201ENST00000548357 1007 ntBASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 GPR182-203ENST00000622922 591 ntBASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
CUEDC1Q9NWM3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 FGD5P1-202ENST00000614866 2498 ntBASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CUEDC1Q9NWM3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms