Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.28■□□□□ 0.2
HIPK3Q9H422 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.28■□□□□ 0.2
HIPK3Q9H422 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.28■□□□□ 0.2
HIPK3Q9H422 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.28■□□□□ 0.2
HIPK3Q9H422 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
HIPK3Q9H422 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HIPK3Q9H422 AL513523.2-202ENST00000427283 2040 ntBASIC16.28■□□□□ 0.2
HIPK3Q9H422 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.28■□□□□ 0.2
HIPK3Q9H422 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HIPK3Q9H422 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 AC144522.1-201ENST00000625111 1658 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 AL583805.1-201ENST00000391389 531 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 KRT18P66-201ENST00000452970 1269 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 AP000358.1-201ENST00000456260 156 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 AC130709.1-201ENST00000484779 1212 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 ALG3P1-201ENST00000508806 1114 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 RBM8B-201ENST00000555532 525 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.27■□□□□ 0.2
HIPK3Q9H422 PHBP15-201ENST00000574228 665 ntBASIC16.27■□□□□ 0.2
HIPK3Q9H422 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HIPK3Q9H422 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIPK3Q9H422 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
HIPK3Q9H422 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.27■□□□□ 0.19
HIPK3Q9H422 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.27■□□□□ 0.19
HIPK3Q9H422 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIPK3Q9H422 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HIPK3Q9H422 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HIPK3Q9H422 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 AC015909.3-201ENST00000572855 1794 ntBASIC16.26■□□□□ 0.19
HIPK3Q9H422 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 AC097065.1-201ENST00000425737 517 ntBASIC16.26■□□□□ 0.19
HIPK3Q9H422 IGHV3-37-201ENST00000518544 340 ntBASIC16.26■□□□□ 0.19
HIPK3Q9H422 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 AC003102.2-201ENST00000589195 1469 ntBASIC16.26■□□□□ 0.19
HIPK3Q9H422 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HIPK3Q9H422 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HIPK3Q9H422 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms