Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 WASH3P-207ENST00000560956 1394 ntBASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.03□□□□□ -0.48
CHRDL1Q9BU40 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 AC138969.3-201ENST00000546612 1459 ntBASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 AC138932.2-201ENST00000548268 1459 ntBASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 AC126755.4-201ENST00000549796 1459 ntBASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 AC005840.4-201ENST00000541242 2494 ntBASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CHRDL1Q9BU40 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AC114501.2-201ENST00000439631 535 ntBASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AC025181.2-201ENST00000606994 802 ntBASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CHRDL1Q9BU40 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.01□□□□□ -0.49
CHRDL1Q9BU40 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms