Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.77□□□□□ -0.2
SNX18Q96RF0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.77□□□□□ -0.2
SNX18Q96RF0 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SNX18Q96RF0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.77□□□□□ -0.2
SNX18Q96RF0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 AC092580.3-201ENST00000430932 139 ntBASIC13.77□□□□□ -0.21
SNX18Q96RF0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 AC241585.1-201ENST00000433527 519 ntBASIC13.77□□□□□ -0.21
SNX18Q96RF0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 AP000845.1-201ENST00000581677 2131 ntBASIC13.77□□□□□ -0.21
SNX18Q96RF0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.77□□□□□ -0.21
SNX18Q96RF0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SNX18Q96RF0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SNX18Q96RF0 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 AC092337.1-201ENST00000568699 1129 ntBASIC13.76□□□□□ -0.21
SNX18Q96RF0 LINC02560-201ENST00000596379 459 ntBASIC13.76□□□□□ -0.21
SNX18Q96RF0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.76□□□□□ -0.21
SNX18Q96RF0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 AL109936.8-201ENST00000641772 604 ntBASIC13.76□□□□□ -0.21
SNX18Q96RF0 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SNX18Q96RF0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SNX18Q96RF0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms