Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 ZNF839-209ENST00000559185 2905 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 ZNF648-201ENST00000339948 3649 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 AC009549.1-201ENST00000603468 1686 ntBASIC9.04□□□□□ -0.96
SVIPQ8NHG7 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC9.04□□□□□ -0.96
SVIPQ8NHG7 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 SYNGAP1-207ENST00000628646 4264 ntTSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 TTC14-201ENST00000296015 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AC025280.2-201ENST00000625056 2547 ntBASIC9.03□□□□□ -0.96
SVIPQ8NHG7 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 C11orf54-214ENST00000540113 2442 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AJ239328.1-201ENST00000626237 4807 ntTSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 DLGAP1-AS5-202ENST00000565811 2594 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 KRASP1-201ENST00000407852 552 ntBASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AC083836.1-201ENST00000519366 2125 ntTSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 CYB5RL-209ENST00000534324 1148 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AP001542.1-201ENST00000591314 200 ntBASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AL139041.1-201ENST00000605480 610 ntBASIC9.03□□□□□ -0.96
SVIPQ8NHG7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AC098679.1-201ENST00000503611 2917 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 KCNE1B-202ENST00000618699 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 TTC12-219ENST00000529221 2315 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 SLC6A2-203ENST00000414754 3201 ntTSL 5 BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 POLR2M-202ENST00000380557 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SVIPQ8NHG7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 USO1-204ENST00000514213 4034 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 CLUHP8-201ENST00000547527 1485 ntBASIC9.02□□□□□ -0.96
SVIPQ8NHG7 AL360004.1-201ENST00000358748 3258 ntTSL 2 BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 CCDC87-201ENST00000333861 2908 ntAPPRIS P1 BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC9.02□□□□□ -0.96
SVIPQ8NHG7 AC005549.1-201ENST00000579438 1629 ntBASIC9.02□□□□□ -0.96
SVIPQ8NHG7 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 UBASH3A-201ENST00000291535 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 FLT4-206ENST00000502649 4140 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 ADGRF3-202ENST00000333478 3896 ntTSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AFG3L2P1-201ENST00000521792 1763 ntBASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AP000265.1-201ENST00000565959 1782 ntBASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AC135506.1-201ENST00000603877 1799 ntBASIC9.02□□□□□ -0.97
SVIPQ8NHG7 OLMALINC-201ENST00000454935 2551 ntTSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.02□□□□□ -0.97
SVIPQ8NHG7 MLC1-201ENST00000311597 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms