RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 NISCHQ9Y2I1 1504 aa21.6■■□□□ 1.05
ZNF648-201ENST00000339948 SHROOM4Q9ULL8 1493 aa20.12■□□□□ 0.81
ZNF648-201ENST00000339948 SUPT5HO00267 1087 aaKnown RBP20.03■□□□□ 0.8
ZNF648-201ENST00000339948 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
ZNF648-201ENST00000339948 PCGF6Q9BYE7 350 aa19.45■□□□□ 0.7
ZNF648-201ENST00000339948 PPARGC1BQ86YN6 1023 aaKnown RBP19.31■□□□□ 0.68
ZNF648-201ENST00000339948 HRCP23327 699 aa19.21■□□□□ 0.67
ZNF648-201ENST00000339948 EHMT2Q96KQ7 1210 aa19.03■□□□□ 0.64
ZNF648-201ENST00000339948 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
ZNF648-201ENST00000339948 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
ZNF648-201ENST00000339948 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
ZNF648-201ENST00000339948 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
ZNF648-201ENST00000339948 TRIM26Q12899 539 aaPredicted RBP18.46■□□□□ 0.55
ZNF648-201ENST00000339948 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
ZNF648-201ENST00000339948 TRIM41Q8WV44 630 aa18.29■□□□□ 0.52
ZNF648-201ENST00000339948 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
ZNF648-201ENST00000339948 SCAF1Q9H7N4 1312 aaKnown RBP18.17■□□□□ 0.5
ZNF648-201ENST00000339948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.12■□□□□ 0.49
ZNF648-201ENST00000339948 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
ZNF648-201ENST00000339948 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
ZNF648-201ENST00000339948 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.49
ZNF648-201ENST00000339948 PELP1Q8IZL8 1130 aaKnown RBP18.02■□□□□ 0.47
ZNF648-201ENST00000339948 CCDC180Q9P1Z9 1646 aa17.99■□□□□ 0.47
ZNF648-201ENST00000339948 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
ZNF648-201ENST00000339948 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
ZNF648-201ENST00000339948 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
ZNF648-201ENST00000339948 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
ZNF648-201ENST00000339948 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.43
ZNF648-201ENST00000339948 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.43
ZNF648-201ENST00000339948 RANGAP1P46060 587 aaPredicted RBP17.72■□□□□ 0.43
ZNF648-201ENST00000339948 UBTFP17480 764 aaKnown RBP17.59■□□□□ 0.41
ZNF648-201ENST00000339948 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
ZNF648-201ENST00000339948 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
ZNF648-201ENST00000339948 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
ZNF648-201ENST00000339948 RB1CC1Q8TDY2 1594 aa17.39■□□□□ 0.37
ZNF648-201ENST00000339948 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
ZNF648-201ENST00000339948 MIER1Q8N108 512 aa17.34■□□□□ 0.37
ZNF648-201ENST00000339948 APLP2Q06481 763 aa17.29■□□□□ 0.36
ZNF648-201ENST00000339948 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
ZNF648-201ENST00000339948 ABCC9O60706 1549 aa17.22■□□□□ 0.35
ZNF648-201ENST00000339948 ITGAEP38570 1179 aa17.17■□□□□ 0.34
ZNF648-201ENST00000339948 BCANQ96GW7 911 aa17.14■□□□□ 0.33
ZNF648-201ENST00000339948 MYT1Q01538 1121 aa17.14■□□□□ 0.33
ZNF648-201ENST00000339948 CSRNP3Q8WYN3 585 aa17.09■□□□□ 0.33
ZNF648-201ENST00000339948 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
ZNF648-201ENST00000339948 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
ZNF648-201ENST00000339948 SOGA1O94964 1423 aa17.03■□□□□ 0.32
ZNF648-201ENST00000339948 ABCC8Q09428 1581 aa17■□□□□ 0.31
ZNF648-201ENST00000339948 PABPN1Q86U42 306 aaKnown RBP eCLIP17■□□□□ 0.31
ZNF648-201ENST00000339948 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
ZNF648-201ENST00000339948 WIZO95785 1651 aa16.93■□□□□ 0.3
ZNF648-201ENST00000339948 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
ZNF648-201ENST00000339948 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
ZNF648-201ENST00000339948 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
ZNF648-201ENST00000339948 HIRIP3Q9BW71 556 aaPredicted RBP16.82■□□□□ 0.28
ZNF648-201ENST00000339948 KCNH8Q96L42 1107 aa16.81■□□□□ 0.28
ZNF648-201ENST00000339948 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
ZNF648-201ENST00000339948 FKBP8Q14318 412 aa16.75■□□□□ 0.27
ZNF648-201ENST00000339948 CLIP1P30622 1438 aa16.74■□□□□ 0.27
ZNF648-201ENST00000339948 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
ZNF648-201ENST00000339948 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
ZNF648-201ENST00000339948 NEFLP07196 543 aa16.7■□□□□ 0.26
ZNF648-201ENST00000339948 NACADO15069 1562 aa16.69■□□□□ 0.26
ZNF648-201ENST00000339948 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
ZNF648-201ENST00000339948 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
ZNF648-201ENST00000339948 GOLGA3Q08378 1498 aa16.66■□□□□ 0.26
ZNF648-201ENST00000339948 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
ZNF648-201ENST00000339948 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.25
ZNF648-201ENST00000339948 FAM50AQ14320 339 aaKnown RBP16.64■□□□□ 0.25
ZNF648-201ENST00000339948 IRX6P78412 446 aaPredicted RBP16.6■□□□□ 0.25
ZNF648-201ENST00000339948 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
ZNF648-201ENST00000339948 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.25
ZNF648-201ENST00000339948 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
ZNF648-201ENST00000339948 SIN3AQ96ST3 1273 aa16.56■□□□□ 0.24
ZNF648-201ENST00000339948 BAZ1AQ9NRL2 1556 aaPredicted RBP16.53■□□□□ 0.24
ZNF648-201ENST00000339948 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
ZNF648-201ENST00000339948 BCL11AQ9H165 835 aa16.48■□□□□ 0.23
ZNF648-201ENST00000339948 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
ZNF648-201ENST00000339948 EEA1Q15075 1411 aa16.48■□□□□ 0.23
ZNF648-201ENST00000339948 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
ZNF648-201ENST00000339948 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
ZNF648-201ENST00000339948 ANP32CO43423 234 aa16.43■□□□□ 0.22
ZNF648-201ENST00000339948 SENP3-EIF4A1A0A087X0R7 540 aa16.42■□□□□ 0.22
ZNF648-201ENST00000339948 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
ZNF648-201ENST00000339948 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
ZNF648-201ENST00000339948 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
ZNF648-201ENST00000339948 HNRNPUQ00839 825 aaKnown RBP eCLIP16.37■□□□□ 0.21
ZNF648-201ENST00000339948 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
ZNF648-201ENST00000339948 POLR3GLQ9BT43 218 aa16.35■□□□□ 0.21
ZNF648-201ENST00000339948 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
ZNF648-201ENST00000339948 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
ZNF648-201ENST00000339948 RAB3GAP2Q9H2M9 1393 aa16.28■□□□□ 0.2
ZNF648-201ENST00000339948 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
ZNF648-201ENST00000339948 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.19
ZNF648-201ENST00000339948 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
ZNF648-201ENST00000339948 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
ZNF648-201ENST00000339948 KIF21BO75037 1637 aa16.25■□□□□ 0.19
ZNF648-201ENST00000339948 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
ZNF648-201ENST00000339948 SYNJ1O43426 1573 aa16.24■□□□□ 0.19
ZNF648-201ENST00000339948 NBR1Q14596 966 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms