Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
CCDC25Q86WR0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 AC005829.1-201ENST00000570002 483 ntBASIC15.58■□□□□ 0.08
CCDC25Q86WR0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC25Q86WR0 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 AC011474.4-201ENST00000623523 2076 ntBASIC15.57■□□□□ 0.08
CCDC25Q86WR0 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 TPT1P11-201ENST00000458482 498 ntBASIC15.57■□□□□ 0.08
CCDC25Q86WR0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 AC022447.6-201ENST00000515522 438 ntBASIC15.57■□□□□ 0.08
CCDC25Q86WR0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 KRT18P58-201ENST00000527480 1120 ntBASIC15.57■□□□□ 0.08
CCDC25Q86WR0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC25Q86WR0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms