Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 UXT-AS1-201ENST00000590504 1525 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MIR346-201ENST00000362234 95 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 SPCS2P4-201ENST00000436160 681 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MIR3687-2-201ENST00000577708 61 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MIR3687-1-201ENST00000614492 61 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 AC138969.3-201ENST00000546612 1459 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 AC138932.2-201ENST00000548268 1459 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 AC126755.4-201ENST00000549796 1459 ntBASIC12.01□□□□□ -0.49
FAM78BQ5VT40 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
FAM78BQ5VT40 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
FAM78BQ5VT40 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
FAM78BQ5VT40 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12□□□□□ -0.49
FAM78BQ5VT40 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
FAM78BQ5VT40 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12□□□□□ -0.49
FAM78BQ5VT40 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
FAM78BQ5VT40 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12□□□□□ -0.49
FAM78BQ5VT40 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12□□□□□ -0.49
FAM78BQ5VT40 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
FAM78BQ5VT40 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
FAM78BQ5VT40 AL139385.1-201ENST00000611744 3272 ntBASIC12□□□□□ -0.49
FAM78BQ5VT40 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
FAM78BQ5VT40 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
FAM78BQ5VT40 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12□□□□□ -0.49
FAM78BQ5VT40 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 ELL2P1-201ENST00000413990 1906 ntBASIC12□□□□□ -0.49
FAM78BQ5VT40 REXO1L4P-201ENST00000605109 1937 ntBASIC12□□□□□ -0.49
FAM78BQ5VT40 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
FAM78BQ5VT40 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
FAM78BQ5VT40 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12□□□□□ -0.49
FAM78BQ5VT40 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12□□□□□ -0.49
FAM78BQ5VT40 AL592309.1-201ENST00000443127 649 ntBASIC12□□□□□ -0.49
FAM78BQ5VT40 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12□□□□□ -0.49
FAM78BQ5VT40 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms