Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 AL023775.1-201ENST00000454907 1746 ntBASIC19.4■□□□□ 0.7
CCDC27Q2M243 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 AP006547.1-201ENST00000563435 692 ntBASIC19.4■□□□□ 0.7
CCDC27Q2M243 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC27Q2M243 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
CCDC27Q2M243 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
CCDC27Q2M243 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CCDC27Q2M243 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC27Q2M243 MIR658-201ENST00000385210 100 ntBASIC19.39■□□□□ 0.69
CCDC27Q2M243 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC27Q2M243 ATP5G2P4-201ENST00000442175 420 ntBASIC19.39■□□□□ 0.69
CCDC27Q2M243 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 MIR4783-201ENST00000580343 82 ntBASIC19.39■□□□□ 0.69
CCDC27Q2M243 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC27Q2M243 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC27Q2M243 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CCDC27Q2M243 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC27Q2M243 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 SHC1P1-201ENST00000425230 1745 ntBASIC19.38■□□□□ 0.69
CCDC27Q2M243 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 MIR6074-201ENST00000612054 107 ntBASIC19.38■□□□□ 0.69
CCDC27Q2M243 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC27Q2M243 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC27Q2M243 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC27Q2M243 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
CCDC27Q2M243 KRT8P28-201ENST00000433288 1390 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms