Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
IRX4P78413 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.73■□□□□ 0.11
IRX4P78413 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
IRX4P78413 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
IRX4P78413 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.72■□□□□ 0.11
IRX4P78413 FAM86LP-201ENST00000478302 853 ntBASIC15.72■□□□□ 0.11
IRX4P78413 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.72■□□□□ 0.11
IRX4P78413 AC068587.3-201ENST00000526613 355 ntBASIC15.72■□□□□ 0.11
IRX4P78413 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.72■□□□□ 0.11
IRX4P78413 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.72■□□□□ 0.11
IRX4P78413 AP000812.2-201ENST00000538934 718 ntBASIC15.72■□□□□ 0.11
IRX4P78413 ENPP7P5-201ENST00000541031 1031 ntBASIC15.72■□□□□ 0.11
IRX4P78413 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 BRI3BPP1-201ENST00000594224 787 ntBASIC15.72■□□□□ 0.11
IRX4P78413 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.72■□□□□ 0.11
IRX4P78413 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
IRX4P78413 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
IRX4P78413 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
IRX4P78413 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
IRX4P78413 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
IRX4P78413 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.71■□□□□ 0.11
IRX4P78413 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
IRX4P78413 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.71■□□□□ 0.11
IRX4P78413 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
IRX4P78413 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.71■□□□□ 0.11
IRX4P78413 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
IRX4P78413 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
IRX4P78413 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 MIR1247-201ENST00000408206 136 ntBASIC15.71■□□□□ 0.11
IRX4P78413 GPAA1P2-201ENST00000417923 928 ntBASIC15.71■□□□□ 0.11
IRX4P78413 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.71■□□□□ 0.11
IRX4P78413 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.71■□□□□ 0.11
IRX4P78413 AC010328.2-201ENST00000597698 1111 ntBASIC15.71■□□□□ 0.11
IRX4P78413 AC243960.2-201ENST00000600996 747 ntBASIC15.71■□□□□ 0.11
IRX4P78413 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
IRX4P78413 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.71■□□□□ 0.11
IRX4P78413 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
IRX4P78413 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms