Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SLC25A1P53007 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
SLC25A1P53007 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SLC25A1P53007 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.34□□□□□ -0.27
SLC25A1P53007 KLF2P2-201ENST00000416807 1039 ntBASIC13.34□□□□□ -0.27
SLC25A1P53007 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.34□□□□□ -0.27
SLC25A1P53007 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.34□□□□□ -0.27
SLC25A1P53007 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 AP001582.1-201ENST00000525856 295 ntBASIC13.34□□□□□ -0.27
SLC25A1P53007 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.34□□□□□ -0.27
SLC25A1P53007 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.34□□□□□ -0.27
SLC25A1P53007 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.34□□□□□ -0.27
SLC25A1P53007 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 SALL4P5-201ENST00000419001 1760 ntBASIC13.34□□□□□ -0.27
SLC25A1P53007 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.34□□□□□ -0.27
SLC25A1P53007 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SLC25A1P53007 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SLC25A1P53007 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 CICP4-201ENST00000447359 2812 ntBASIC13.34□□□□□ -0.27
SLC25A1P53007 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SLC25A1P53007 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.33□□□□□ -0.27
SLC25A1P53007 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SLC25A1P53007 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.33□□□□□ -0.27
SLC25A1P53007 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SLC25A1P53007 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SLC25A1P53007 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SLC25A1P53007 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SLC25A1P53007 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 SBF1P1-201ENST00000444527 5631 ntBASIC13.33□□□□□ -0.28
SLC25A1P53007 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.33□□□□□ -0.28
SLC25A1P53007 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 EIF3FP3-201ENST00000434851 1086 ntBASIC13.33□□□□□ -0.28
SLC25A1P53007 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 MIR8072-201ENST00000614241 80 ntBASIC13.33□□□□□ -0.28
SLC25A1P53007 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.33□□□□□ -0.28
SLC25A1P53007 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.33□□□□□ -0.28
SLC25A1P53007 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 AC003102.2-201ENST00000589195 1469 ntBASIC13.33□□□□□ -0.28
SLC25A1P53007 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SLC25A1P53007 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SLC25A1P53007 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms