Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNA3P52797 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
EFNA3P52797 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNA3P52797 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
EFNA3P52797 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNA3P52797 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNA3P52797 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNA3P52797 AC091271.1-201ENST00000611877 1162 ntBASIC14.03□□□□□ -0.16
EFNA3P52797 ZACNP1-201ENST00000612259 710 ntBASIC14.03□□□□□ -0.16
EFNA3P52797 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 AP001002.3-201ENST00000623482 206 ntBASIC14.03□□□□□ -0.16
EFNA3P52797 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNA3P52797 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNA3P52797 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNA3P52797 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNA3P52797 AC013726.1-201ENST00000563747 2285 ntBASIC14.03□□□□□ -0.16
EFNA3P52797 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNA3P52797 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNA3P52797 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
EFNA3P52797 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
EFNA3P52797 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNA3P52797 AL161772.1-201ENST00000610494 4412 ntBASIC14.02□□□□□ -0.16
EFNA3P52797 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.02□□□□□ -0.16
EFNA3P52797 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EFNA3P52797 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNA3P52797 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
EFNA3P52797 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
EFNA3P52797 AJ011931.1-201ENST00000618749 2492 ntBASIC14.02□□□□□ -0.16
EFNA3P52797 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
EFNA3P52797 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.02□□□□□ -0.16
EFNA3P52797 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
EFNA3P52797 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.02□□□□□ -0.16
EFNA3P52797 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNA3P52797 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
EFNA3P52797 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
EFNA3P52797 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNA3P52797 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.02□□□□□ -0.17
EFNA3P52797 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNA3P52797 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 AC022494.1-201ENST00000466044 728 ntBASIC14.02□□□□□ -0.17
EFNA3P52797 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.02□□□□□ -0.17
EFNA3P52797 AC005730.2-201ENST00000564549 1184 ntBASIC14.02□□□□□ -0.17
EFNA3P52797 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNA3P52797 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNA3P52797 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNA3P52797 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
EFNA3P52797 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
EFNA3P52797 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.02□□□□□ -0.17
EFNA3P52797 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.02□□□□□ -0.17
EFNA3P52797 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
EFNA3P52797 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
EFNA3P52797 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EFNA3P52797 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EFNA3P52797 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms