Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.44□□□□□ -0.42
SNCAP37840 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SNCAP37840 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SNCAP37840 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SNCAP37840 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.43□□□□□ -0.42
SNCAP37840 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 AC018529.2-202ENST00000611482 3087 ntBASIC12.43□□□□□ -0.42
SNCAP37840 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
SNCAP37840 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
SNCAP37840 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
SNCAP37840 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.43□□□□□ -0.42
SNCAP37840 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 AC118758.2-201ENST00000614242 2813 ntBASIC12.43□□□□□ -0.42
SNCAP37840 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 AC084364.1-201ENST00000551967 1556 ntBASIC12.43□□□□□ -0.42
SNCAP37840 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SNCAP37840 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.43□□□□□ -0.42
SNCAP37840 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SNCAP37840 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 AL139385.1-201ENST00000611744 3272 ntBASIC12.42□□□□□ -0.42
SNCAP37840 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.42□□□□□ -0.42
SNCAP37840 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
SNCAP37840 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SNCAP37840 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms