Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14□□□□□ -0.17
TNFRSF1BP20333 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFRSF1BP20333 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14□□□□□ -0.17
TNFRSF1BP20333 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14□□□□□ -0.17
TNFRSF1BP20333 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14□□□□□ -0.17
TNFRSF1BP20333 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14□□□□□ -0.17
TNFRSF1BP20333 TPT1P11-201ENST00000458482 498 ntBASIC14□□□□□ -0.17
TNFRSF1BP20333 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TNFRSF1BP20333 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14□□□□□ -0.17
TNFRSF1BP20333 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14□□□□□ -0.17
TNFRSF1BP20333 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14□□□□□ -0.17
TNFRSF1BP20333 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFRSF1BP20333 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14□□□□□ -0.17
TNFRSF1BP20333 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TNFRSF1BP20333 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14□□□□□ -0.17
TNFRSF1BP20333 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TNFRSF1BP20333 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC093525.8-201ENST00000624099 1342 ntBASIC13.99□□□□□ -0.17
TNFRSF1BP20333 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC067750.1-201ENST00000608826 6545 ntBASIC13.99□□□□□ -0.17
TNFRSF1BP20333 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 MEIS3P1-201ENST00000495167 958 ntBASIC13.99□□□□□ -0.17
TNFRSF1BP20333 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ZNF890P-202ENST00000530367 1156 ntBASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC025678.2-201ENST00000562061 970 ntBASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC009407.1-201ENST00000568958 598 ntBASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 AC107373.2-201ENST00000607735 490 ntBASIC13.99□□□□□ -0.17
TNFRSF1BP20333 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TNFRSF1BP20333 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 KRT8P14-201ENST00000414254 1442 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 DRD5P1-201ENST00000456605 1438 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 AC089987.1-201ENST00000551654 2209 ntBASIC13.98□□□□□ -0.17
TNFRSF1BP20333 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TNFRSF1BP20333 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms