Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.72□□□□□ -0.21
CD53P19397 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.72□□□□□ -0.21
CD53P19397 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 AL607033.1-201ENST00000623900 1599 ntBASIC13.72□□□□□ -0.21
CD53P19397 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 AC092135.3-201ENST00000624151 1846 ntBASIC13.72□□□□□ -0.21
CD53P19397 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 ANKRD19P-201ENST00000338192 862 ntBASIC13.72□□□□□ -0.21
CD53P19397 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.72□□□□□ -0.21
CD53P19397 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.72□□□□□ -0.21
CD53P19397 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 BNIP3P42-201ENST00000454982 569 ntBASIC13.72□□□□□ -0.21
CD53P19397 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.72□□□□□ -0.21
CD53P19397 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.72□□□□□ -0.21
CD53P19397 AC104596.2-201ENST00000512793 793 ntBASIC13.72□□□□□ -0.21
CD53P19397 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.72□□□□□ -0.21
CD53P19397 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 LINC01922-201ENST00000562582 719 ntBASIC13.72□□□□□ -0.21
CD53P19397 RARRES2P5-201ENST00000564013 466 ntBASIC13.72□□□□□ -0.21
CD53P19397 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 BTNL10-201ENST00000595971 695 ntBASIC13.72□□□□□ -0.21
CD53P19397 BNIP3P29-201ENST00000598302 571 ntBASIC13.72□□□□□ -0.21
CD53P19397 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 AC011447.5-201ENST00000616168 564 ntBASIC13.72□□□□□ -0.21
CD53P19397 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.72□□□□□ -0.21
CD53P19397 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 AC027601.5-201ENST00000624065 2482 ntBASIC13.72□□□□□ -0.21
CD53P19397 CLK3P2-201ENST00000427566 1453 ntBASIC13.72□□□□□ -0.21
CD53P19397 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.72□□□□□ -0.21
CD53P19397 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.72□□□□□ -0.21
CD53P19397 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CD53P19397 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CD53P19397 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD53P19397 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.72□□□□□ -0.21
CD53P19397 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
CD53P19397 CICP11-201ENST00000434745 2827 ntBASIC13.71□□□□□ -0.21
CD53P19397 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.71□□□□□ -0.21
CD53P19397 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 KRT43P-201ENST00000434019 910 ntBASIC13.71□□□□□ -0.21
CD53P19397 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CD53P19397 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.71□□□□□ -0.21
CD53P19397 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.71□□□□□ -0.21
CD53P19397 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.71□□□□□ -0.21
CD53P19397 AC025048.3-201ENST00000590609 569 ntBASIC13.71□□□□□ -0.21
CD53P19397 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CD53P19397 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 AC005702.4-201ENST00000618393 416 ntBASIC13.71□□□□□ -0.21
CD53P19397 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms