Protein–RNA interactions for Protein: P17483

HOXB4, Homeobox protein Hox-B4, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB4P17483 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HOXB4P17483 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
HOXB4P17483 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HOXB4P17483 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.57□□□□□ -0.4
HOXB4P17483 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HOXB4P17483 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.57□□□□□ -0.4
HOXB4P17483 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HOXB4P17483 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
HOXB4P17483 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HOXB4P17483 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HOXB4P17483 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HOXB4P17483 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HOXB4P17483 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
HOXB4P17483 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.56□□□□□ -0.4
HOXB4P17483 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 AC013268.4-201ENST00000637413 2228 ntBASIC12.56□□□□□ -0.4
HOXB4P17483 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.56□□□□□ -0.4
HOXB4P17483 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC12.56□□□□□ -0.4
HOXB4P17483 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 ITGB5-AS1-201ENST00000495917 460 ntTSL 3 BASIC12.56□□□□□ -0.4
HOXB4P17483 AC004066.1-201ENST00000502488 802 ntBASIC12.56□□□□□ -0.4
HOXB4P17483 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.56□□□□□ -0.4
HOXB4P17483 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.56□□□□□ -0.4
HOXB4P17483 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.56□□□□□ -0.4
HOXB4P17483 AC103810.10-201ENST00000606504 343 ntBASIC12.56□□□□□ -0.4
HOXB4P17483 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
HOXB4P17483 AC242376.2-201ENST00000619355 883 ntBASIC12.56□□□□□ -0.4
HOXB4P17483 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 MME-218ENST00000625667 363 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 AC087481.3-201ENST00000602886 1894 ntBASIC12.56□□□□□ -0.4
HOXB4P17483 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.56□□□□□ -0.4
HOXB4P17483 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HOXB4P17483 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.56□□□□□ -0.4
HOXB4P17483 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
HOXB4P17483 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.55□□□□□ -0.4
HOXB4P17483 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 AC023824.1-201ENST00000562945 2975 ntBASIC12.55□□□□□ -0.4
HOXB4P17483 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 AL157791.1-201ENST00000553667 1699 ntBASIC12.55□□□□□ -0.4
HOXB4P17483 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.55□□□□□ -0.4
HOXB4P17483 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.55□□□□□ -0.4
HOXB4P17483 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.55□□□□□ -0.4
HOXB4P17483 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
HOXB4P17483 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 RNU1-114P-201ENST00000365297 166 ntBASIC12.55□□□□□ -0.4
HOXB4P17483 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.55□□□□□ -0.4
HOXB4P17483 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HOXB4P17483 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.55□□□□□ -0.4
HOXB4P17483 SERBP1P2-201ENST00000436888 1164 ntBASIC12.55□□□□□ -0.4
HOXB4P17483 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms