Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
UBL4AP11441 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.99□□□□□ -0.17
UBL4AP11441 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
UBL4AP11441 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.98□□□□□ -0.17
UBL4AP11441 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
UBL4AP11441 AL157414.3-201ENST00000624276 1954 ntBASIC13.98□□□□□ -0.17
UBL4AP11441 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.98□□□□□ -0.17
UBL4AP11441 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.98□□□□□ -0.17
UBL4AP11441 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBL4AP11441 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.98□□□□□ -0.17
UBL4AP11441 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.98□□□□□ -0.17
UBL4AP11441 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.98□□□□□ -0.17
UBL4AP11441 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.98□□□□□ -0.17
UBL4AP11441 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.98□□□□□ -0.17
UBL4AP11441 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.98□□□□□ -0.17
UBL4AP11441 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.98□□□□□ -0.17
UBL4AP11441 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 SPDYE22P-201ENST00000582158 798 ntBASIC13.98□□□□□ -0.17
UBL4AP11441 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.98□□□□□ -0.17
UBL4AP11441 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.98□□□□□ -0.17
UBL4AP11441 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.98□□□□□ -0.17
UBL4AP11441 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
UBL4AP11441 FGD5P1-202ENST00000614866 2498 ntBASIC13.98□□□□□ -0.17
UBL4AP11441 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
UBL4AP11441 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
UBL4AP11441 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
UBL4AP11441 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
UBL4AP11441 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.97□□□□□ -0.17
UBL4AP11441 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
UBL4AP11441 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.97□□□□□ -0.17
UBL4AP11441 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.97□□□□□ -0.17
UBL4AP11441 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
UBL4AP11441 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
UBL4AP11441 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.97□□□□□ -0.17
UBL4AP11441 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.97□□□□□ -0.17
UBL4AP11441 WASH4P-201ENST00000564273 1246 ntBASIC13.97□□□□□ -0.17
UBL4AP11441 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.97□□□□□ -0.17
UBL4AP11441 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.97□□□□□ -0.17
UBL4AP11441 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.97□□□□□ -0.17
UBL4AP11441 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.97□□□□□ -0.17
UBL4AP11441 AC092364.2-202ENST00000597012 1073 ntBASIC13.97□□□□□ -0.17
UBL4AP11441 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
UBL4AP11441 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.97□□□□□ -0.17
UBL4AP11441 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
UBL4AP11441 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.97□□□□□ -0.17
UBL4AP11441 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
UBL4AP11441 REXO1L5P-201ENST00000622260 2098 ntBASIC13.97□□□□□ -0.17
UBL4AP11441 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
UBL4AP11441 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.97□□□□□ -0.17
UBL4AP11441 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBL4AP11441 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBL4AP11441 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBL4AP11441 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.96□□□□□ -0.17
UBL4AP11441 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBL4AP11441 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBL4AP11441 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
UBL4AP11441 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
UBL4AP11441 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.96□□□□□ -0.17
UBL4AP11441 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms