Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.59■□□□□ 0.25
LGR5O75473 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
LGR5O75473 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.59■□□□□ 0.25
LGR5O75473 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
LGR5O75473 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 TCAF2P1-201ENST00000291129 2421 ntBASIC16.59■□□□□ 0.25
LGR5O75473 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LGR5O75473 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LGR5O75473 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LGR5O75473 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LGR5O75473 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LGR5O75473 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
LGR5O75473 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LGR5O75473 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LGR5O75473 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LGR5O75473 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LGR5O75473 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
LGR5O75473 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 FXNP2-201ENST00000411625 547 ntBASIC16.58■□□□□ 0.24
LGR5O75473 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 KLF2P1-201ENST00000447438 1042 ntBASIC16.58■□□□□ 0.24
LGR5O75473 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 AC104073.2-201ENST00000453737 312 ntBASIC16.58■□□□□ 0.24
LGR5O75473 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.58■□□□□ 0.24
LGR5O75473 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.58■□□□□ 0.24
LGR5O75473 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.58■□□□□ 0.24
LGR5O75473 AC013355.1-201ENST00000562625 723 ntBASIC16.58■□□□□ 0.24
LGR5O75473 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 AC091544.8-201ENST00000619490 361 ntBASIC16.58■□□□□ 0.24
LGR5O75473 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LGR5O75473 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LGR5O75473 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 AC244394.1-201ENST00000435000 1665 ntBASIC16.58■□□□□ 0.24
LGR5O75473 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LGR5O75473 AC007292.2-201ENST00000593524 1812 ntBASIC16.58■□□□□ 0.24
LGR5O75473 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.58■□□□□ 0.24
LGR5O75473 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LGR5O75473 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.58■□□□□ 0.24
LGR5O75473 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LGR5O75473 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LGR5O75473 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LGR5O75473 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LGR5O75473 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.57■□□□□ 0.24
LGR5O75473 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.57■□□□□ 0.24
LGR5O75473 Z97180.1-201ENST00000445173 988 ntBASIC16.57■□□□□ 0.24
LGR5O75473 RN7SL11P-201ENST00000471305 293 ntBASIC16.57■□□□□ 0.24
LGR5O75473 AC106794.1-201ENST00000506935 792 ntBASIC16.57■□□□□ 0.24
LGR5O75473 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.57■□□□□ 0.24
LGR5O75473 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LGR5O75473 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 RN7SL774P-201ENST00000577467 290 ntBASIC16.57■□□□□ 0.24
LGR5O75473 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.57■□□□□ 0.24
LGR5O75473 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LGR5O75473 AP000346.4-201ENST00000614827 381 ntBASIC16.57■□□□□ 0.24
LGR5O75473 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.57■□□□□ 0.24
LGR5O75473 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LGR5O75473 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.57■□□□□ 0.24
LGR5O75473 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LGR5O75473 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms