Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
CDH16O75309 GPS2P2-201ENST00000430745 888 ntBASIC15.22■□□□□ 0.03
CDH16O75309 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.22■□□□□ 0.03
CDH16O75309 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 SNHG9-202ENST00000564014 471 ntBASIC15.22■□□□□ 0.03
CDH16O75309 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
CDH16O75309 AC134684.3-201ENST00000641758 218 ntBASIC15.22■□□□□ 0.03
CDH16O75309 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH16O75309 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH16O75309 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
CDH16O75309 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CDH16O75309 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CDH16O75309 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CDH16O75309 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CDH16O75309 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH16O75309 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CDH16O75309 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CDH16O75309 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CDH16O75309 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CDH16O75309 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.21■□□□□ 0.03
CDH16O75309 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 AC004835.2-201ENST00000603762 682 ntBASIC15.21■□□□□ 0.03
CDH16O75309 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.21■□□□□ 0.03
CDH16O75309 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.21■□□□□ 0.03
CDH16O75309 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 AC015818.8-201ENST00000587907 1519 ntBASIC15.21■□□□□ 0.03
CDH16O75309 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CDH16O75309 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDH16O75309 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.21■□□□□ 0.02
CDH16O75309 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CDH16O75309 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.21■□□□□ 0.02
CDH16O75309 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH16O75309 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH16O75309 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.21■□□□□ 0.02
CDH16O75309 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CDH16O75309 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDH16O75309 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CDH16O75309 AC020910.6-201ENST00000623084 1459 ntBASIC15.2■□□□□ 0.02
CDH16O75309 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDH16O75309 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDH16O75309 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.2■□□□□ 0.02
CDH16O75309 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDH16O75309 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms