Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 BET1L-202ENST00000332865 533 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 IGHV3-47-201ENST00000425060 335 ntBASIC10.66□□□□□ -0.7
TMEM238C9JI98 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 AC099336.1-202ENST00000602961 463 ntBASIC10.66□□□□□ -0.7
TMEM238C9JI98 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 AC073592.4-201ENST00000623827 446 ntBASIC10.66□□□□□ -0.7
TMEM238C9JI98 AP000867.4-201ENST00000641616 219 ntBASIC10.66□□□□□ -0.7
TMEM238C9JI98 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 AC110048.1-201ENST00000604293 2157 ntBASIC10.66□□□□□ -0.7
TMEM238C9JI98 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
TMEM238C9JI98 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM238C9JI98 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 AC130686.1-201ENST00000622936 2466 ntBASIC10.65□□□□□ -0.7
TMEM238C9JI98 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 CYB561-217ENST00000582997 877 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 METTL23-204ENST00000586752 904 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 DBP-204ENST00000599385 709 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM238C9JI98 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM238C9JI98 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms