Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 ECM1P1-201ENST00000604092 1279 ntBASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 AC232323.1-201ENST00000540724 2099 ntBASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 LINC00552-201ENST00000625151 2579 ntBASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
COL4A3BPQ9Y5P4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
COL4A3BPQ9Y5P4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 TPM3P8-201ENST00000330554 643 ntBASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 CD8B2-202ENST00000417670 633 ntBASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 AC023310.1-201ENST00000554836 735 ntBASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
COL4A3BPQ9Y5P4 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms