Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 AC239868.1-201ENST00000369385 493 ntBASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 AC242376.1-201ENST00000559033 726 ntBASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 MIR5572-201ENST00000583188 137 ntBASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 U62317.3-201ENST00000608319 855 ntBASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB7Q9Y5E2 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 WASH3P-207ENST00000560956 1394 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 C18orf15-201ENST00000623680 2534 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AC078875.1-201ENST00000431907 724 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AC073150.1-201ENST00000450406 1084 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 CEP164P1-201ENST00000455142 418 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 MIR7845-201ENST00000618396 99 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 ZBED1P1-201ENST00000502364 1930 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 AC126365.1-201ENST00000578585 1514 ntBASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB7Q9Y5E2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB7Q9Y5E2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms