Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
HHLA3Q9XRX5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 Z82170.1-201ENST00000625081 3192 ntBASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 PMS2P2-201ENST00000425039 1128 ntBASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 BASP1P1-201ENST00000430708 665 ntBASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
HHLA3Q9XRX5 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 AC015922.1-201ENST00000421102 1152 ntBASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
HHLA3Q9XRX5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms