Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 AC064801.2-201ENST00000625052 1303 ntBASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 AC011270.2-201ENST00000624293 2550 ntBASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHANK2Q9UPX8 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 PIN4P1-201ENST00000451079 396 ntBASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 POLD4-208ENST00000532830 904 ntTSL 3 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 AC104506.1-201ENST00000609247 429 ntBASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 AJ011931.1-201ENST00000618749 2492 ntBASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 HLA-DQB1-202ENST00000399079 1501 ntBASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHANK2Q9UPX8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 NEU3-207ENST00000534628 746 ntTSL 2 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 AC073911.3-201ENST00000624401 631 ntBASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 AL354702.1-201ENST00000442006 1960 ntBASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 LINC01815-202ENST00000641468 1409 ntBASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 AC105137.3-201ENST00000617588 984 ntBASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 MIR6858-201ENST00000620733 67 ntBASIC21.71■■□□□ 1.07
SHANK2Q9UPX8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SHANK2Q9UPX8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 HPGD-203ENST00000422112 805 ntTSL 2 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 NSD1-211ENST00000511258 809 ntTSL 3 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 RN7SL665P-201ENST00000578793 300 ntBASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 RN7SL596P-201ENST00000582123 288 ntBASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC21.7■■□□□ 1.06
SHANK2Q9UPX8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHANK2Q9UPX8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms