Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AL513477.1-201ENST00000602865 2407 ntBASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 RNMTL1P1-201ENST00000454103 560 ntBASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AL132994.2-201ENST00000603120 687 ntBASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AC106881.1-201ENST00000605849 3329 ntBASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
NPC1L1Q9UHC9 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 MIR1247-201ENST00000408206 136 ntBASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 AC078875.1-201ENST00000431907 724 ntBASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 SNORD3B-2-202ENST00000571722 791 ntBASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 AC004923.1-202ENST00000642106 209 ntBASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NPC1L1Q9UHC9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 XBP1P1-201ENST00000436573 652 ntBASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 AC009779.1-201ENST00000551138 283 ntBASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 RN7SL832P-201ENST00000607781 1756 ntBASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.86■□□□□ 0.77
NPC1L1Q9UHC9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms