Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL008721.1-201ENST00000609964 604 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 AL022328.1-201ENST00000610050 478 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 AC132938.4-201ENST00000623835 848 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 CICP14-201ENST00000629111 2732 ntBASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
KCMF1Q9P0J7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 AC018665.1-201ENST00000622927 1362 ntBASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 AC018442.1-201ENST00000421439 2061 ntBASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
KCMF1Q9P0J7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 POM121L8P-201ENST00000417732 1281 ntBASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 POM121L9P-203ENST00000441984 1285 ntBASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 FO681548.1-201ENST00000455617 1132 ntBASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ACA64.2-201ENST00000459014 129 ntBASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.25□□□□□ -0.13
KCMF1Q9P0J7 AC106886.1-201ENST00000568660 600 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms