Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SP110Q9HB58 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
SP110Q9HB58 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
SP110Q9HB58 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.42■□□□□ 0.06
SP110Q9HB58 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.42■□□□□ 0.06
SP110Q9HB58 AC025279.2-201ENST00000569730 653 ntBASIC15.42■□□□□ 0.06
SP110Q9HB58 GNRHR2-203ENST00000581100 1187 ntBASIC15.42■□□□□ 0.06
SP110Q9HB58 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.42■□□□□ 0.06
SP110Q9HB58 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.42■□□□□ 0.06
SP110Q9HB58 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SP110Q9HB58 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SP110Q9HB58 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SP110Q9HB58 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.42■□□□□ 0.06
SP110Q9HB58 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
SP110Q9HB58 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.42■□□□□ 0.06
SP110Q9HB58 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SP110Q9HB58 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SP110Q9HB58 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SP110Q9HB58 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SP110Q9HB58 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.41■□□□□ 0.06
SP110Q9HB58 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 AC016694.1-201ENST00000434179 700 ntBASIC15.41■□□□□ 0.06
SP110Q9HB58 AC245100.3-201ENST00000441281 285 ntBASIC15.41■□□□□ 0.06
SP110Q9HB58 AC234783.1-201ENST00000441761 496 ntBASIC15.41■□□□□ 0.06
SP110Q9HB58 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.41■□□□□ 0.06
SP110Q9HB58 FO681548.1-201ENST00000455617 1132 ntBASIC15.41■□□□□ 0.06
SP110Q9HB58 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.41■□□□□ 0.06
SP110Q9HB58 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
SP110Q9HB58 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 RN7SL48P-201ENST00000579283 293 ntBASIC15.41■□□□□ 0.06
SP110Q9HB58 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 ENPP7P14-201ENST00000621765 1040 ntBASIC15.41■□□□□ 0.06
SP110Q9HB58 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.41■□□□□ 0.06
SP110Q9HB58 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
SP110Q9HB58 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SP110Q9HB58 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
SP110Q9HB58 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 LINC02228-204ENST00000642115 2962 ntBASIC15.41■□□□□ 0.06
SP110Q9HB58 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SP110Q9HB58 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SP110Q9HB58 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
SP110Q9HB58 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SP110Q9HB58 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.41■□□□□ 0.06
SP110Q9HB58 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 C8orf49-201ENST00000525043 1968 ntBASIC15.4■□□□□ 0.06
SP110Q9HB58 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.4■□□□□ 0.06
SP110Q9HB58 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SP110Q9HB58 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.4■□□□□ 0.06
SP110Q9HB58 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SP110Q9HB58 TPM3P8-201ENST00000330554 643 ntBASIC15.4■□□□□ 0.06
SP110Q9HB58 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.4■□□□□ 0.06
SP110Q9HB58 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.4■□□□□ 0.06
SP110Q9HB58 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.4■□□□□ 0.06
SP110Q9HB58 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms