Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 FAM58CP-201ENST00000435741 640 ntBASIC12.25□□□□□ -0.45
RAB40CQ96S21 AC079140.1-201ENST00000508039 487 ntBASIC12.25□□□□□ -0.45
RAB40CQ96S21 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 SLC25A39P2-201ENST00000537614 270 ntBASIC12.25□□□□□ -0.45
RAB40CQ96S21 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 KRT8P12-202ENST00000472924 1397 ntBASIC12.25□□□□□ -0.45
RAB40CQ96S21 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 TCAM1P-207ENST00000485295 1537 ntBASIC12.25□□□□□ -0.45
RAB40CQ96S21 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
RAB40CQ96S21 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.25□□□□□ -0.45
RAB40CQ96S21 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 ADH5P3-201ENST00000433842 1137 ntBASIC12.24□□□□□ -0.45
RAB40CQ96S21 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.24□□□□□ -0.45
RAB40CQ96S21 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 KRT18P43-201ENST00000469825 1281 ntBASIC12.24□□□□□ -0.45
RAB40CQ96S21 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 AL360270.3-201ENST00000609118 1348 ntBASIC12.24□□□□□ -0.45
RAB40CQ96S21 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 C20orf181-201ENST00000623918 480 ntBASIC12.24□□□□□ -0.45
RAB40CQ96S21 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
RAB40CQ96S21 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
RAB40CQ96S21 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
RAB40CQ96S21 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB40CQ96S21 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms