Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FOXRED1Q96CU9 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AC069120.2-201ENST00000524091 540 ntBASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AC140878.1-201ENST00000565277 250 ntBASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 AC051619.7-201ENST00000568314 623 ntBASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FOXRED1Q96CU9 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
FOXRED1Q96CU9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
FOXRED1Q96CU9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
FOXRED1Q96CU9 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
FOXRED1Q96CU9 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
FOXRED1Q96CU9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.15□□□□□ -0.31
FOXRED1Q96CU9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AL360270.3-201ENST00000609118 1348 ntBASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
FOXRED1Q96CU9 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms