Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SLC44A1Q8WWI5 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 KRT8P24-201ENST00000560290 1559 ntBASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC009477.1-201ENST00000452936 217 ntBASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC097493.3-201ENST00000509725 367 ntBASIC15.07■□□□□ 0
SLC44A1Q8WWI5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AL158211.3-201ENST00000607385 239 ntBASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AL662799.1-202ENST00000614205 422 ntBASIC15.07■□□□□ 0
SLC44A1Q8WWI5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 KRT18P28-201ENST00000453838 1332 ntBASIC15.07■□□□□ 0
SLC44A1Q8WWI5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AC020910.6-201ENST00000623084 1459 ntBASIC15.07■□□□□ 0
SLC44A1Q8WWI5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC44A1Q8WWI5 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 NUS1P3-201ENST00000423502 862 ntBASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TSSK5P-201ENST00000423978 907 ntBASIC15.06■□□□□ 0
SLC44A1Q8WWI5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 FAM86LP-201ENST00000478302 853 ntBASIC15.06■□□□□ 0
SLC44A1Q8WWI5 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 SPDYE18-201ENST00000510091 1050 ntBASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.06■□□□□ 0
SLC44A1Q8WWI5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.06■□□□□ 0
SLC44A1Q8WWI5 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms