Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 AC107918.4-201ENST00000641966 3141 ntBASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CFAP61Q8NHU2 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 AC027601.5-201ENST00000624065 2482 ntBASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 SPDYE19P-201ENST00000338590 713 ntBASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 HMGN1P19-201ENST00000436976 333 ntBASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 GNAQP1-201ENST00000444815 1067 ntBASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 SRD5A3P1-201ENST00000603021 949 ntBASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 AL096865.1-201ENST00000606796 927 ntBASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CFAP61Q8NHU2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.33■□□□□ 0.05
CFAP61Q8NHU2 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 AL928921.2-201ENST00000641325 2442 ntBASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 DOC2GP-202ENST00000514950 1163 ntBASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.33■□□□□ 0.04
CFAP61Q8NHU2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms