Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 ELL2P1-201ENST00000413990 1906 ntBASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 AC090505.1-201ENST00000430515 1834 ntBASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00242Q5T6M2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 KRT8P24-201ENST00000560290 1559 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AC004832.2-201ENST00000426397 482 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CEND1P1-201ENST00000451006 455 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MIR4453-201ENST00000584019 89 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MTDHP5-201ENST00000598980 586 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AC000095.1-201ENST00000603208 874 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AL137783.1-201ENST00000623494 1896 ntBASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00242Q5T6M2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00242Q5T6M2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms