Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
PRKCDQ05655 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC107890.1-201ENST00000422478 521 ntBASIC13.91□□□□□ -0.18
PRKCDQ05655 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC092580.3-201ENST00000430932 139 ntBASIC13.91□□□□□ -0.18
PRKCDQ05655 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.91□□□□□ -0.18
PRKCDQ05655 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.91□□□□□ -0.18
PRKCDQ05655 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC004066.1-201ENST00000502488 802 ntBASIC13.91□□□□□ -0.18
PRKCDQ05655 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC004449.1-201ENST00000564240 433 ntBASIC13.91□□□□□ -0.18
PRKCDQ05655 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.91□□□□□ -0.18
PRKCDQ05655 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.91□□□□□ -0.18
PRKCDQ05655 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 PPT1-213ENST00000641319 2388 ntBASIC13.91□□□□□ -0.18
PRKCDQ05655 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 ST20-AS1-201ENST00000560255 4223 ntBASIC13.91□□□□□ -0.18
PRKCDQ05655 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.91□□□□□ -0.18
PRKCDQ05655 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
PRKCDQ05655 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.91□□□□□ -0.18
PRKCDQ05655 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRKCDQ05655 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 AL360270.3-201ENST00000609118 1348 ntBASIC13.9□□□□□ -0.18
PRKCDQ05655 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
PRKCDQ05655 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
PRKCDQ05655 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.9□□□□□ -0.18
PRKCDQ05655 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
PRKCDQ05655 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.9□□□□□ -0.18
PRKCDQ05655 AC097493.3-201ENST00000509725 367 ntBASIC13.9□□□□□ -0.18
PRKCDQ05655 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
PRKCDQ05655 AL158211.3-201ENST00000607385 239 ntBASIC13.9□□□□□ -0.18
PRKCDQ05655 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.9□□□□□ -0.18
PRKCDQ05655 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRKCDQ05655 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms