Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.23■□□□□ 0.51
NUP98P52948 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC18.23■□□□□ 0.51
NUP98P52948 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 AC105917.1-201ENST00000506637 2539 ntBASIC18.23■□□□□ 0.51
NUP98P52948 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.23■□□□□ 0.51
NUP98P52948 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 AC025271.4-201ENST00000621477 1726 ntBASIC18.23■□□□□ 0.51
NUP98P52948 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.23■□□□□ 0.51
NUP98P52948 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 HIST2H2BA-201ENST00000412169 381 ntBASIC18.23■□□□□ 0.51
NUP98P52948 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC18.23■□□□□ 0.51
NUP98P52948 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC18.23■□□□□ 0.51
NUP98P52948 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NUP98P52948 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC18.23■□□□□ 0.51
NUP98P52948 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NUP98P52948 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NUP98P52948 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 IL9RP3-201ENST00000442856 1674 ntBASIC18.22■□□□□ 0.51
NUP98P52948 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 AC090502.4-201ENST00000551714 1386 ntBASIC18.22■□□□□ 0.51
NUP98P52948 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NUP98P52948 LINC01815-202ENST00000641468 1409 ntBASIC18.22■□□□□ 0.51
NUP98P52948 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
NUP98P52948 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 SCARNA12-201ENST00000459155 270 ntBASIC18.22■□□□□ 0.51
NUP98P52948 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC18.22■□□□□ 0.51
NUP98P52948 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.22■□□□□ 0.51
NUP98P52948 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NUP98P52948 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.22■□□□□ 0.51
NUP98P52948 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
NUP98P52948 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC18.22■□□□□ 0.51
NUP98P52948 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NUP98P52948 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
NUP98P52948 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
NUP98P52948 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.21■□□□□ 0.51
NUP98P52948 KRT17P5-201ENST00000332088 839 ntBASIC18.21■□□□□ 0.51
NUP98P52948 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.21■□□□□ 0.51
NUP98P52948 RPL7P35-201ENST00000446943 740 ntBASIC18.21■□□□□ 0.51
NUP98P52948 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.21■□□□□ 0.51
NUP98P52948 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP98P52948 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP98P52948 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 BRD7P5-201ENST00000299197 1822 ntBASIC18.21■□□□□ 0.51
NUP98P52948 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NUP98P52948 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NUP98P52948 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP98P52948 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NUP98P52948 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP98P52948 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.21■□□□□ 0.51
NUP98P52948 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NUP98P52948 AC007326.1-201ENST00000604539 458 ntBASIC18.21■□□□□ 0.51
NUP98P52948 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.21■□□□□ 0.51
NUP98P52948 AC009560.1-201ENST00000620208 434 ntBASIC18.21■□□□□ 0.51
NUP98P52948 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
NUP98P52948 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.5
NUP98P52948 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 AC132872.4-202ENST00000622924 2756 ntBASIC18.2■□□□□ 0.5
NUP98P52948 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.2■□□□□ 0.5
NUP98P52948 AL354702.1-201ENST00000442006 1960 ntBASIC18.2■□□□□ 0.5
NUP98P52948 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NUP98P52948 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUP98P52948 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC18.2■□□□□ 0.5
NUP98P52948 LINC00554-201ENST00000564841 3011 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms