Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KDM5CP41229 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KDM5CP41229 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KDM5CP41229 MRPL37P1-201ENST00000592451 1337 ntBASIC21.84■■□□□ 1.09
KDM5CP41229 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KDM5CP41229 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC21.84■■□□□ 1.09
KDM5CP41229 PPP1R2P4-201ENST00000424051 595 ntBASIC21.84■■□□□ 1.09
KDM5CP41229 RN7SL23P-201ENST00000484055 275 ntBASIC21.84■■□□□ 1.09
KDM5CP41229 NAA40-205ENST00000539656 577 ntTSL 4 BASIC21.84■■□□□ 1.09
KDM5CP41229 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC21.84■■□□□ 1.09
KDM5CP41229 AC013268.4-201ENST00000637413 2228 ntBASIC21.84■■□□□ 1.09
KDM5CP41229 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KDM5CP41229 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
KDM5CP41229 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KDM5CP41229 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDM5CP41229 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC21.84■■□□□ 1.09
KDM5CP41229 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC21.84■■□□□ 1.09
KDM5CP41229 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KDM5CP41229 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC21.83■■□□□ 1.09
KDM5CP41229 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
KDM5CP41229 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
KDM5CP41229 NME4-203ENST00000397722 1232 ntTSL 2 BASIC21.83■■□□□ 1.09
KDM5CP41229 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC21.83■■□□□ 1.09
KDM5CP41229 AC018638.5-201ENST00000450885 754 ntBASIC21.83■■□□□ 1.09
KDM5CP41229 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
KDM5CP41229 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC21.83■■□□□ 1.09
KDM5CP41229 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
KDM5CP41229 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.83■■□□□ 1.09
KDM5CP41229 AC010976.2-201ENST00000609697 852 ntBASIC21.83■■□□□ 1.09
KDM5CP41229 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC21.83■■□□□ 1.09
KDM5CP41229 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KDM5CP41229 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.83■■□□□ 1.09
KDM5CP41229 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KDM5CP41229 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KDM5CP41229 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
KDM5CP41229 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KDM5CP41229 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
KDM5CP41229 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
KDM5CP41229 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KDM5CP41229 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC21.83■■□□□ 1.08
KDM5CP41229 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KDM5CP41229 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
KDM5CP41229 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KDM5CP41229 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 AIRN-201ENST00000601203 4374 ntBASIC21.82■■□□□ 1.08
KDM5CP41229 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC21.82■■□□□ 1.08
KDM5CP41229 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC21.82■■□□□ 1.08
KDM5CP41229 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC21.82■■□□□ 1.08
KDM5CP41229 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC21.82■■□□□ 1.08
KDM5CP41229 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
KDM5CP41229 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC21.82■■□□□ 1.08
KDM5CP41229 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
KDM5CP41229 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
KDM5CP41229 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 RNVU1-8-201ENST00000364272 125 ntBASIC21.82■■□□□ 1.08
KDM5CP41229 SURF4-203ENST00000371991 715 ntTSL 3 BASIC21.82■■□□□ 1.08
KDM5CP41229 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.82■■□□□ 1.08
KDM5CP41229 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC21.82■■□□□ 1.08
KDM5CP41229 RN7SL494P-201ENST00000461517 304 ntBASIC21.82■■□□□ 1.08
KDM5CP41229 AC026470.1-201ENST00000478038 846 ntBASIC21.82■■□□□ 1.08
KDM5CP41229 FAM86KP-201ENST00000509817 987 ntBASIC21.82■■□□□ 1.08
KDM5CP41229 FAM86B3P-203ENST00000523992 854 ntBASIC21.82■■□□□ 1.08
KDM5CP41229 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 HMGB1P24-201ENST00000611897 328 ntBASIC21.82■■□□□ 1.08
KDM5CP41229 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
KDM5CP41229 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
KDM5CP41229 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 CTBP2P8-201ENST00000422584 1330 ntBASIC21.81■■□□□ 1.08
KDM5CP41229 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 AC139712.1-201ENST00000378256 1875 ntBASIC21.81■■□□□ 1.08
KDM5CP41229 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
KDM5CP41229 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KDM5CP41229 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms